2025-05-30
Advanced Bio-logic Solutions
San Francisco,CA
Description:
Description:
FULLY REMOTE - PST HRs
6 months WITH EXTENSION UP TO 3 YRS
Responsibilities
Maintain and develop in-house endpoint association and modeling/prediction pipeline that use cutting edge machine learning methodologies to develop biomarkers of clinical response and resistance, extend analytical capabilities of biomarker platform
Develop and maintain in-house survival prediction pipeline that use multi-omics data to predict survival endpoints
Perform multi-omics integration analysis
Perform pan-study analysis to find biomarkers that are predictive of safety and efficacy endpoints.
Serve as a subject matter expert and implementation lead for application of open-source R and python ML modeling libraries to clinical trial data and real world data (from external partners, publicly available data or consortia data).
Work cross-functionally with stakeholders in Research and Development.
Communicate findings and insights and present them to the team.
Basic Qualifications Doctorate degree and 1-2 years of scientific experience OR Master's degree and 3-5 years of scientific experience OR Bachelor's degree and 5-7 years of scientific experience
Preferred Qualifications
PhD or MS in Bioinformatics, Mathematics, Statistics, Computer Science, or a related quantitative field.
Significant experience in bioinformatics, applied mathematics and/or statistics to analyze multi-modal, multi-dimensional and large-scale biological datasets including whole genome/exome sequencing, RNA-seq, and high-throughput proteomics data.
Familiarity of clinical bioinformatics domain and associated technologies, real world biomarker data
Working experience of data QC, data preprocessing, feature selection, model building and deployment.
Fluency in both Python and R programming languages and associated DevOps tools (version control, ML Ops).
Top 3 Must Have Skill Sets:
Machine learning
Experience working with clinical data and multi-omics data
R programming language
Pay Rate between $81 - $92/hr on W2 based on experience.
"This posting is for Contingent Worker, not an FTE" #J-18808-Ljbffr
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